Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH8O95206 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDH8O95206 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH8O95206 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH8O95206 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDH8O95206 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH8O95206 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.68■□□□□ 0.42
PCDH8O95206 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDH8O95206 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDH8O95206 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDH8O95206 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDH8O95206 AC009113.1-201ENST00000570267 2443 ntBASIC17.68■□□□□ 0.42
PCDH8O95206 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDH8O95206 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH8O95206 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH8O95206 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDH8O95206 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH8O95206 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH8O95206 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDH8O95206 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH8O95206 OR7E14P-202ENST00000530490 1290 ntBASIC17.67■□□□□ 0.42
PCDH8O95206 AC139887.3-201ENST00000568585 713 ntBASIC17.67■□□□□ 0.42
PCDH8O95206 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDH8O95206 MTDHP4-201ENST00000600287 670 ntBASIC17.67■□□□□ 0.42
PCDH8O95206 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDH8O95206 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH8O95206 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH8O95206 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDH8O95206 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH8O95206 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDH8O95206 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH8O95206 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDH8O95206 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH8O95206 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDH8O95206 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH8O95206 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH8O95206 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH8O95206 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 AC009949.1-201ENST00000623048 1830 ntBASIC17.66■□□□□ 0.42
PCDH8O95206 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH8O95206 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDH8O95206 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDH8O95206 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH8O95206 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH8O95206 BX005266.1-201ENST00000473402 457 ntBASIC17.66■□□□□ 0.42
PCDH8O95206 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH8O95206 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDH8O95206 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.66■□□□□ 0.42
PCDH8O95206 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PCDH8O95206 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH8O95206 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
PCDH8O95206 MIR7706-201ENST00000613747 67 ntBASIC17.66■□□□□ 0.42
PCDH8O95206 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDH8O95206 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDH8O95206 AF228730.7-201ENST00000641842 219 ntBASIC17.66■□□□□ 0.42
PCDH8O95206 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
PCDH8O95206 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PCDH8O95206 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH8O95206 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH8O95206 PMPCAP1-201ENST00000508114 1576 ntBASIC17.66■□□□□ 0.42
PCDH8O95206 AC243591.1-201ENST00000452967 1364 ntBASIC17.66■□□□□ 0.42
PCDH8O95206 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH8O95206 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDH8O95206 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH8O95206 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH8O95206 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms