Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.5■□□□□ 0.55
OPHN1O60890 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 AC139713.2-201ENST00000641328 2723 ntBASIC18.5■□□□□ 0.55
OPHN1O60890 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 TSPY19P-201ENST00000418461 509 ntBASIC18.5■□□□□ 0.55
OPHN1O60890 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.5■□□□□ 0.55
OPHN1O60890 TSPY18P-201ENST00000441642 509 ntBASIC18.5■□□□□ 0.55
OPHN1O60890 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.5■□□□□ 0.55
OPHN1O60890 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.5■□□□□ 0.55
OPHN1O60890 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.5■□□□□ 0.55
OPHN1O60890 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.5■□□□□ 0.55
OPHN1O60890 AL732292.2-201ENST00000609649 430 ntBASIC18.5■□□□□ 0.55
OPHN1O60890 AC006538.3-201ENST00000612495 578 ntBASIC18.5■□□□□ 0.55
OPHN1O60890 AL031008.1-201ENST00000619963 541 ntBASIC18.5■□□□□ 0.55
OPHN1O60890 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
OPHN1O60890 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.5■□□□□ 0.55
OPHN1O60890 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
OPHN1O60890 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
OPHN1O60890 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.5■□□□□ 0.55
OPHN1O60890 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.49■□□□□ 0.55
OPHN1O60890 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
OPHN1O60890 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
OPHN1O60890 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
OPHN1O60890 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.49■□□□□ 0.55
OPHN1O60890 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.49■□□□□ 0.55
OPHN1O60890 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.49■□□□□ 0.55
OPHN1O60890 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.49■□□□□ 0.55
OPHN1O60890 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.49■□□□□ 0.55
OPHN1O60890 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.49■□□□□ 0.55
OPHN1O60890 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 AP000867.3-201ENST00000524675 377 ntBASIC18.49■□□□□ 0.55
OPHN1O60890 AL160237.2-201ENST00000556165 472 ntBASIC18.49■□□□□ 0.55
OPHN1O60890 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 AC132938.6-201ENST00000623828 1655 ntBASIC18.49■□□□□ 0.55
OPHN1O60890 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
OPHN1O60890 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
OPHN1O60890 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
OPHN1O60890 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPHN1O60890 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.49■□□□□ 0.55
OPHN1O60890 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.48■□□□□ 0.55
OPHN1O60890 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
OPHN1O60890 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
OPHN1O60890 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
OPHN1O60890 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.48■□□□□ 0.55
OPHN1O60890 TSPY22P-201ENST00000427496 604 ntBASIC18.48■□□□□ 0.55
OPHN1O60890 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.48■□□□□ 0.55
OPHN1O60890 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.48■□□□□ 0.55
OPHN1O60890 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.48■□□□□ 0.55
OPHN1O60890 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.48■□□□□ 0.55
OPHN1O60890 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.48■□□□□ 0.55
OPHN1O60890 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
OPHN1O60890 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
OPHN1O60890 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPHN1O60890 FER1L4-210ENST00000615531 5998 ntBASIC18.48■□□□□ 0.55
OPHN1O60890 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms