Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 AP005901.3-202ENST00000581653 237 ntBASIC16.65■□□□□ 0.26
PRAMEF2O60811 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRAMEF2O60811 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRAMEF2O60811 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PRAMEF2O60811 KRT8P47-201ENST00000604727 1398 ntBASIC16.64■□□□□ 0.26
PRAMEF2O60811 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 NUS1P2-201ENST00000417358 873 ntBASIC16.64■□□□□ 0.25
PRAMEF2O60811 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 AC079781.3-201ENST00000449110 356 ntBASIC16.64■□□□□ 0.25
PRAMEF2O60811 AC091607.1-201ENST00000490318 1060 ntBASIC16.64■□□□□ 0.25
PRAMEF2O60811 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 AC104692.2-201ENST00000603054 253 ntBASIC16.64■□□□□ 0.25
PRAMEF2O60811 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF2O60811 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PRAMEF2O60811 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 POM121L3P-201ENST00000419331 1163 ntBASIC16.63■□□□□ 0.25
PRAMEF2O60811 AC009078.2-202ENST00000463353 338 ntBASIC16.63■□□□□ 0.25
PRAMEF2O60811 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF2O60811 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF2O60811 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF2O60811 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF2O60811 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms