Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GFRA3O60609 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.05■□□□□ 0.32
GFRA3O60609 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
GFRA3O60609 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 GNAS-203ENST00000306120 1878 ntBASIC17.04■□□□□ 0.32
GFRA3O60609 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
GFRA3O60609 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
GFRA3O60609 TSSK5P-201ENST00000423978 907 ntBASIC17.04■□□□□ 0.32
GFRA3O60609 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.04■□□□□ 0.32
GFRA3O60609 AL353779.1-201ENST00000434793 351 ntBASIC17.04■□□□□ 0.32
GFRA3O60609 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC17.04■□□□□ 0.32
GFRA3O60609 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.04■□□□□ 0.32
GFRA3O60609 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.04■□□□□ 0.32
GFRA3O60609 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.04■□□□□ 0.32
GFRA3O60609 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GFRA3O60609 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.04■□□□□ 0.32
GFRA3O60609 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.04■□□□□ 0.32
GFRA3O60609 AC019129.2-201ENST00000609837 1235 ntBASIC17.04■□□□□ 0.32
GFRA3O60609 AC003101.2-201ENST00000612557 442 ntBASIC17.04■□□□□ 0.32
GFRA3O60609 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GFRA3O60609 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.04■□□□□ 0.32
GFRA3O60609 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.04■□□□□ 0.32
GFRA3O60609 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 AC073130.3-201ENST00000624389 2278 ntBASIC17.04■□□□□ 0.32
GFRA3O60609 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
GFRA3O60609 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GFRA3O60609 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.04■□□□□ 0.32
GFRA3O60609 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA3O60609 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.03■□□□□ 0.32
GFRA3O60609 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.03■□□□□ 0.32
GFRA3O60609 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
GFRA3O60609 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 COX5BP2-201ENST00000392354 334 ntBASIC17.03■□□□□ 0.32
GFRA3O60609 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GFRA3O60609 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.03■□□□□ 0.32
GFRA3O60609 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.03■□□□□ 0.32
GFRA3O60609 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.03■□□□□ 0.32
GFRA3O60609 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.03■□□□□ 0.32
GFRA3O60609 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.03■□□□□ 0.32
GFRA3O60609 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.03■□□□□ 0.32
GFRA3O60609 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.03■□□□□ 0.32
GFRA3O60609 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
GFRA3O60609 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GFRA3O60609 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GFRA3O60609 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.02■□□□□ 0.32
GFRA3O60609 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
GFRA3O60609 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.02■□□□□ 0.32
GFRA3O60609 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GFRA3O60609 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.02■□□□□ 0.32
GFRA3O60609 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
GFRA3O60609 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.02■□□□□ 0.32
GFRA3O60609 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.02■□□□□ 0.32
GFRA3O60609 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.02■□□□□ 0.32
GFRA3O60609 API5-211ENST00000534695 560 ntTSL 5 BASIC17.02■□□□□ 0.32
GFRA3O60609 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.02■□□□□ 0.32
GFRA3O60609 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.02■□□□□ 0.32
GFRA3O60609 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.02■□□□□ 0.32
GFRA3O60609 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms