Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.01■□□□□ 0.63
TNRC18O15417 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNRC18O15417 CROCCP4-201ENST00000457096 498 ntBASIC19.01■□□□□ 0.63
TNRC18O15417 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.01■□□□□ 0.63
TNRC18O15417 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TNRC18O15417 AC133552.6-201ENST00000613406 534 ntBASIC19.01■□□□□ 0.63
TNRC18O15417 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNRC18O15417 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNRC18O15417 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNRC18O15417 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNRC18O15417 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNRC18O15417 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TNRC18O15417 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19■□□□□ 0.63
TNRC18O15417 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19■□□□□ 0.63
TNRC18O15417 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19■□□□□ 0.63
TNRC18O15417 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 PI4KAP1-204ENST00000612579 1703 ntBASIC19■□□□□ 0.63
TNRC18O15417 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19■□□□□ 0.63
TNRC18O15417 IGHJ2P-201ENST00000454480 60 ntBASIC19■□□□□ 0.63
TNRC18O15417 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19■□□□□ 0.63
TNRC18O15417 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19■□□□□ 0.63
TNRC18O15417 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19■□□□□ 0.63
TNRC18O15417 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNRC18O15417 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TNRC18O15417 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TNRC18O15417 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.99■□□□□ 0.63
TNRC18O15417 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TNRC18O15417 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.99■□□□□ 0.63
TNRC18O15417 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.99■□□□□ 0.63
TNRC18O15417 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.99■□□□□ 0.63
TNRC18O15417 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 AC112907.3-201ENST00000577781 2400 ntBASIC18.99■□□□□ 0.63
TNRC18O15417 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TNRC18O15417 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TNRC18O15417 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.99■□□□□ 0.63
TNRC18O15417 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.99■□□□□ 0.63
TNRC18O15417 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.99■□□□□ 0.63
TNRC18O15417 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNRC18O15417 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TNRC18O15417 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.99■□□□□ 0.63
TNRC18O15417 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TNRC18O15417 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.99■□□□□ 0.63
TNRC18O15417 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNRC18O15417 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNRC18O15417 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNRC18O15417 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TNRC18O15417 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TNRC18O15417 RPS2P36-201ENST00000456516 831 ntBASIC18.98■□□□□ 0.63
TNRC18O15417 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNRC18O15417 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.98■□□□□ 0.63
TNRC18O15417 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.98■□□□□ 0.63
TNRC18O15417 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.98■□□□□ 0.63
TNRC18O15417 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.98■□□□□ 0.63
TNRC18O15417 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNRC18O15417 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNRC18O15417 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNRC18O15417 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNRC18O15417 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNRC18O15417 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
TNRC18O15417 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TNRC18O15417 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TNRC18O15417 AC104989.1-201ENST00000519711 778 ntBASIC18.98■□□□□ 0.63
TNRC18O15417 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TNRC18O15417 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.98■□□□□ 0.63
TNRC18O15417 AC099778.1-201ENST00000568593 1911 ntBASIC18.98■□□□□ 0.63
TNRC18O15417 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TNRC18O15417 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNRC18O15417 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.97■□□□□ 0.63
TNRC18O15417 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNRC18O15417 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TNRC18O15417 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNRC18O15417 AC011495.1-201ENST00000498085 584 ntBASIC18.97■□□□□ 0.63
TNRC18O15417 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.97■□□□□ 0.63
TNRC18O15417 TEX28P1-201ENST00000613479 1221 ntBASIC18.97■□□□□ 0.63
TNRC18O15417 TEX28P2-201ENST00000617764 1221 ntBASIC18.97■□□□□ 0.63
TNRC18O15417 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms