Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN4O14493 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CLDN4O14493 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN4O14493 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLDN4O14493 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN4O14493 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN4O14493 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN4O14493 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN4O14493 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 CLEC4GP1-201ENST00000596555 870 ntBASIC16.7■□□□□ 0.26
CLDN4O14493 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN4O14493 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN4O14493 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN4O14493 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN4O14493 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLDN4O14493 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLDN4O14493 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN4O14493 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN4O14493 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 COX5BP2-201ENST00000392354 334 ntBASIC16.69■□□□□ 0.26
CLDN4O14493 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN4O14493 AC007967.3-201ENST00000434308 558 ntBASIC16.69■□□□□ 0.26
CLDN4O14493 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN4O14493 FOSL1P1-201ENST00000511041 816 ntBASIC16.69■□□□□ 0.26
CLDN4O14493 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN4O14493 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.69■□□□□ 0.26
CLDN4O14493 BNIP3P18-201ENST00000593976 575 ntBASIC16.69■□□□□ 0.26
CLDN4O14493 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CLDN4O14493 AC138894.3-201ENST00000603787 634 ntBASIC16.69■□□□□ 0.26
CLDN4O14493 AC114341.1-201ENST00000618070 349 ntBASIC16.69■□□□□ 0.26
CLDN4O14493 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN4O14493 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN4O14493 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN4O14493 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN4O14493 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN4O14493 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN4O14493 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN4O14493 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN4O14493 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CLDN4O14493 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 NUS1P2-201ENST00000417358 873 ntBASIC16.68■□□□□ 0.26
CLDN4O14493 AC103564.2-201ENST00000432853 1299 ntBASIC16.68■□□□□ 0.26
CLDN4O14493 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN4O14493 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.68■□□□□ 0.26
CLDN4O14493 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN4O14493 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN4O14493 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.68■□□□□ 0.26
CLDN4O14493 AC011467.2-201ENST00000598425 242 ntBASIC16.68■□□□□ 0.26
CLDN4O14493 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN4O14493 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN4O14493 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN4O14493 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN4O14493 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN4O14493 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN4O14493 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN4O14493 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms