Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM38O00635 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM38O00635 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRIM38O00635 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRIM38O00635 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM38O00635 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM38O00635 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 AC023511.2-201ENST00000618803 211 ntBASIC17.84■□□□□ 0.45
TRIM38O00635 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM38O00635 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM38O00635 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM38O00635 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRIM38O00635 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM38O00635 OR6D1P-202ENST00000641007 5290 ntBASIC17.84■□□□□ 0.45
TRIM38O00635 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM38O00635 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM38O00635 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM38O00635 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.83■□□□□ 0.45
TRIM38O00635 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
TRIM38O00635 AC009053.2-201ENST00000563701 2365 ntBASIC17.83■□□□□ 0.45
TRIM38O00635 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM38O00635 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM38O00635 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM38O00635 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM38O00635 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM38O00635 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM38O00635 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TRIM38O00635 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.83■□□□□ 0.44
TRIM38O00635 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM38O00635 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM38O00635 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM38O00635 TP73-AS1-207ENST00000624167 988 ntBASIC17.83■□□□□ 0.44
TRIM38O00635 AC093677.2-201ENST00000600169 1863 ntBASIC17.83■□□□□ 0.44
TRIM38O00635 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM38O00635 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM38O00635 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM38O00635 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM38O00635 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM38O00635 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM38O00635 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM38O00635 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM38O00635 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM38O00635 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM38O00635 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
TRIM38O00635 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM38O00635 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM38O00635 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TRIM38O00635 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.82■□□□□ 0.44
TRIM38O00635 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM38O00635 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM38O00635 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TRIM38O00635 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRIM38O00635 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.82■□□□□ 0.44
TRIM38O00635 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM38O00635 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM38O00635 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRIM38O00635 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM38O00635 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM38O00635 KRT18P41-201ENST00000518924 1277 ntBASIC17.82■□□□□ 0.44
TRIM38O00635 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRIM38O00635 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM38O00635 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM38O00635 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
TRIM38O00635 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM38O00635 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM38O00635 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM38O00635 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM38O00635 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM38O00635 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRIM38O00635 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM38O00635 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM38O00635 AC012317.2-201ENST00000623305 2251 ntBASIC17.81■□□□□ 0.44
TRIM38O00635 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM38O00635 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM38O00635 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM38O00635 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM38O00635 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM38O00635 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms