Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.68■□□□□ 0.58
SOX1O00570 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
SOX1O00570 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SOX1O00570 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.68■□□□□ 0.58
SOX1O00570 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.68■□□□□ 0.58
SOX1O00570 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.68■□□□□ 0.58
SOX1O00570 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.68■□□□□ 0.58
SOX1O00570 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
SOX1O00570 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.68■□□□□ 0.58
SOX1O00570 AC132938.2-201ENST00000579188 680 ntBASIC18.68■□□□□ 0.58
SOX1O00570 MIR4259-201ENST00000584466 101 ntBASIC18.68■□□□□ 0.58
SOX1O00570 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SOX1O00570 AL591163.1-201ENST00000641757 987 ntBASIC18.68■□□□□ 0.58
SOX1O00570 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.68■□□□□ 0.58
SOX1O00570 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SOX1O00570 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.68■□□□□ 0.58
SOX1O00570 AC097637.2-201ENST00000624096 1997 ntBASIC18.68■□□□□ 0.58
SOX1O00570 MYLKP1-201ENST00000509077 1580 ntBASIC18.68■□□□□ 0.58
SOX1O00570 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX1O00570 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX1O00570 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX1O00570 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SOX1O00570 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SOX1O00570 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SOX1O00570 COX5BP2-201ENST00000392354 334 ntBASIC18.67■□□□□ 0.58
SOX1O00570 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SOX1O00570 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.67■□□□□ 0.58
SOX1O00570 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SOX1O00570 KRT17P8-201ENST00000540749 863 ntBASIC18.67■□□□□ 0.58
SOX1O00570 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.67■□□□□ 0.58
SOX1O00570 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SOX1O00570 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX1O00570 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SOX1O00570 AL590560.3-201ENST00000623350 461 ntBASIC18.67■□□□□ 0.58
SOX1O00570 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.67■□□□□ 0.58
SOX1O00570 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SOX1O00570 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX1O00570 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX1O00570 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SOX1O00570 AC022144.1-201ENST00000602255 1580 ntBASIC18.67■□□□□ 0.58
SOX1O00570 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SOX1O00570 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SOX1O00570 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SOX1O00570 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX1O00570 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SOX1O00570 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SOX1O00570 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SOX1O00570 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SOX1O00570 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX1O00570 AC140658.5-201ENST00000438532 169 ntBASIC18.66■□□□□ 0.58
SOX1O00570 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.66■□□□□ 0.58
SOX1O00570 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.66■□□□□ 0.58
SOX1O00570 KRT8P23-201ENST00000560090 1207 ntBASIC18.66■□□□□ 0.58
SOX1O00570 LINC01225-203ENST00000563550 1244 ntBASIC18.66■□□□□ 0.58
SOX1O00570 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SOX1O00570 GPR182-203ENST00000622922 591 ntBASIC18.66■□□□□ 0.58
SOX1O00570 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX1O00570 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.66■□□□□ 0.58
SOX1O00570 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SOX1O00570 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX1O00570 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX1O00570 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX1O00570 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.65■□□□□ 0.58
SOX1O00570 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SOX1O00570 UXT-AS1-201ENST00000590504 1525 ntBASIC18.65■□□□□ 0.58
SOX1O00570 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SOX1O00570 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX1O00570 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX1O00570 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.65■□□□□ 0.58
SOX1O00570 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX1O00570 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.65■□□□□ 0.58
SOX1O00570 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.65■□□□□ 0.58
SOX1O00570 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SOX1O00570 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.65■□□□□ 0.58
SOX1O00570 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SOX1O00570 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.65■□□□□ 0.58
SOX1O00570 MIR4538-201ENST00000581377 78 ntBASIC18.65■□□□□ 0.58
SOX1O00570 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.65■□□□□ 0.58
SOX1O00570 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.65■□□□□ 0.58
SOX1O00570 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX1O00570 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX1O00570 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SOX1O00570 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX1O00570 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX1O00570 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX1O00570 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.64■□□□□ 0.58
SOX1O00570 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SOX1O00570 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SOX1O00570 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SOX1O00570 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SOX1O00570 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SOX1O00570 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX1O00570 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.64■□□□□ 0.57
SOX1O00570 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms