Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TNFRSF11BO00300 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 UBE2SP1-201ENST00000450587 669 ntBASIC16.39■□□□□ 0.21
TNFRSF11BO00300 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 AP003071.4-201ENST00000562276 1284 ntBASIC16.39■□□□□ 0.21
TNFRSF11BO00300 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFRSF11BO00300 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 RBM17P1-201ENST00000453646 1190 ntBASIC16.38■□□□□ 0.21
TNFRSF11BO00300 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.38■□□□□ 0.21
TNFRSF11BO00300 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFRSF11BO00300 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 AC010653.2-201ENST00000623505 997 ntBASIC16.37■□□□□ 0.21
TNFRSF11BO00300 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms