Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PRYP5-201ENST00000451909 266 ntBASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 AF228730.7-201ENST00000641842 219 ntBASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
C1QTNF3-AMACRE9PGA6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.71■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC104581.1-202ENST00000635932 2618 ntBASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PMS2P1-201ENST00000431037 1228 ntBASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC092910.1-201ENST00000482027 1129 ntBASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SLC25A1P1-201ENST00000528351 927 ntBASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC105339.3-201ENST00000560043 636 ntBASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC019129.2-201ENST00000609837 1235 ntBASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC138028.4-201ENST00000564984 1845 ntBASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 RNF165-205ENST00000588679 2904 ntBASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ZNF259P1-201ENST00000407656 1365 ntBASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC002558.1-201ENST00000488906 803 ntBASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC006557.2-201ENST00000592985 1240 ntBASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC132938.5-201ENST00000624980 1813 ntBASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.69■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ABALON-201ENST00000629058 1903 ntBASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 MYCLP1-201ENST00000372451 1075 ntBASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SIGLEC30P-201ENST00000455569 941 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms