Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 GMCL1P1-201ENST00000463439 1581 ntBASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 AL590787.1-201ENST00000568856 1315 ntBASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 LINC01225-203ENST00000563550 1244 ntBASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 AL132655.2-201ENST00000596276 594 ntBASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 AC116407.2-201ENST00000613639 860 ntBASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 AL645728.2-201ENST00000641974 660 ntBASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.38■□□□□ 0.85
TMEM88BA6NKF7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 CLDN5-201ENST00000403084 2357 ntBASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 SPTLC1P1-201ENST00000447199 261 ntBASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 AL158211.5-201ENST00000623583 2518 ntBASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM88BA6NKF7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 GIMAP3P-201ENST00000495150 836 ntBASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 AC084121.4-201ENST00000641598 221 ntBASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 AF228730.8-201ENST00000642140 221 ntBASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM88BA6NKF7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms