Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 AP005242.2-201ENST00000580065 1175 ntBASIC19.22■□□□□ 0.67
CCDC66A2RUB6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
CCDC66A2RUB6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 AC008741.2-201ENST00000612792 3115 ntBASIC19.21■□□□□ 0.67
CCDC66A2RUB6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 AC005052.1-201ENST00000625181 2492 ntBASIC19.21■□□□□ 0.67
CCDC66A2RUB6 AL049637.2-201ENST00000641778 930 ntBASIC19.21■□□□□ 0.67
CCDC66A2RUB6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC66A2RUB6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CCDC66A2RUB6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 AP001094.4-201ENST00000579008 2176 ntBASIC19.2■□□□□ 0.66
CCDC66A2RUB6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 AL355355.2-201ENST00000442321 338 ntBASIC19.2■□□□□ 0.66
CCDC66A2RUB6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC66A2RUB6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms