Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
LOC102724428A0A0B4J2F2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 CROCCP3-202ENST00000420820 1947 ntBASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.36■■□□□ 1.17
LOC102724428A0A0B4J2F2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 HLA-DRB6-201ENST00000411500 1235 ntBASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 ADH5P3-201ENST00000433842 1137 ntBASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 LINC00628-201ENST00000628516 1289 ntBASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.35■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC093677.2-201ENST00000600169 1863 ntBASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 ACTG1P4-201ENST00000425123 1122 ntBASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 ACTL9-202ENST00000612068 1252 ntBASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
LOC102724428A0A0B4J2F2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
LOC102724428A0A0B4J2F2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.33■■□□□ 1.16
LOC102724428A0A0B4J2F2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
LOC102724428A0A0B4J2F2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
LOC102724428A0A0B4J2F2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.33■■□□□ 1.16
LOC102724428A0A0B4J2F2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LOC102724428A0A0B4J2F2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.32■■□□□ 1.16
LOC102724428A0A0B4J2F2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LOC102724428A0A0B4J2F2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LOC102724428A0A0B4J2F2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LOC102724428A0A0B4J2F2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LOC102724428A0A0B4J2F2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.32■■□□□ 1.16
LOC102724428A0A0B4J2F2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.32■■□□□ 1.16
LOC102724428A0A0B4J2F2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LOC102724428A0A0B4J2F2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.32■■□□□ 1.16
LOC102724428A0A0B4J2F2 AC093520.2-201ENST00000561830 333 ntBASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms