Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 AC013268.4-201ENST00000637413 2228 ntBASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 AC053503.5-201ENST00000601508 636 ntBASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 pRNA.6-201ENST00000610482 90 ntBASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 pRNA.5-201ENST00000612139 90 ntBASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 pRNA.11-201ENST00000618423 90 ntBASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 pRNA.13-201ENST00000619112 90 ntBASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 AP002414.2-201ENST00000591780 3365 ntBASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LINC01558Q9Y6Z2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 AC116351.2-201ENST00000606540 1585 ntBASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
LINC01558Q9Y6Z2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 AL023775.1-201ENST00000454907 1746 ntBASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 GPAT2P1-201ENST00000444924 1672 ntBASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 YBX1P1-201ENST00000445822 960 ntBASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 AC241377.3-202ENST00000626088 1088 ntBASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 AC241585.3-202ENST00000628937 1088 ntBASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 AC245100.8-202ENST00000629247 1058 ntBASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms