Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 AC093677.2-201ENST00000600169 1863 ntBASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA6Q9Y5G7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 AF238378.1-201ENST00000526806 358 ntBASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 BNIP3P18-201ENST00000593976 575 ntBASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 AC009102.3-201ENST00000623118 1491 ntBASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 AC138028.4-201ENST00000564984 1845 ntBASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA6Q9Y5G7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA6Q9Y5G7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA6Q9Y5G7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGA6Q9Y5G7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA6Q9Y5G7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA6Q9Y5G7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.08■□□□□ 0.33
PCDHGA6Q9Y5G7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA6Q9Y5G7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 AL591684.3-201ENST00000605187 298 ntBASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 BX640515.1-201ENST00000617215 977 ntBASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 AC114341.1-201ENST00000618070 349 ntBASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA6Q9Y5G7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms