Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFT52Q9Y366 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IFT52Q9Y366 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
IFT52Q9Y366 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 LINC00167-201ENST00000530583 1419 ntBASIC16.64■□□□□ 0.25
IFT52Q9Y366 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 SLC25A3P1-201ENST00000443844 931 ntBASIC16.64■□□□□ 0.25
IFT52Q9Y366 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 GCSHP2-201ENST00000560971 527 ntBASIC16.64■□□□□ 0.25
IFT52Q9Y366 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 AC116407.2-201ENST00000613639 860 ntBASIC16.64■□□□□ 0.25
IFT52Q9Y366 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.64■□□□□ 0.25
IFT52Q9Y366 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFT52Q9Y366 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 ATP5G1P1-201ENST00000448724 379 ntBASIC16.63■□□□□ 0.25
IFT52Q9Y366 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 AC024563.2-201ENST00000603282 481 ntBASIC16.63■□□□□ 0.25
IFT52Q9Y366 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.63■□□□□ 0.25
IFT52Q9Y366 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IFT52Q9Y366 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 AC066615.1-201ENST00000640911 628 ntBASIC16.62■□□□□ 0.25
IFT52Q9Y366 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms