Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 AC009949.1-201ENST00000623048 1830 ntBASIC23.05■■□□□ 1.28
SPG7Q9UQ90 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 ALG1L5P-201ENST00000482043 771 ntBASIC23.04■■□□□ 1.28
SPG7Q9UQ90 MAL2-202ENST00000531508 892 ntTSL 3 BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 C20orf181-201ENST00000623918 480 ntBASIC23.04■■□□□ 1.28
SPG7Q9UQ90 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 GPR89P-201ENST00000407924 1495 ntBASIC23.04■■□□□ 1.28
SPG7Q9UQ90 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPG7Q9UQ90 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 MIR4469-201ENST00000583919 79 ntBASIC23.03■■□□□ 1.28
SPG7Q9UQ90 AL596442.2-201ENST00000610240 980 ntBASIC23.03■■□□□ 1.28
SPG7Q9UQ90 AL513190.1-201ENST00000621254 727 ntBASIC23.03■■□□□ 1.28
SPG7Q9UQ90 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.03■■□□□ 1.28
SPG7Q9UQ90 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 AC009336.1-201ENST00000608941 1553 ntBASIC23.02■■□□□ 1.28
SPG7Q9UQ90 AC097637.2-201ENST00000624096 1997 ntBASIC23.02■■□□□ 1.28
SPG7Q9UQ90 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 MRPL20P1-201ENST00000400819 433 ntBASIC23.02■■□□□ 1.28
SPG7Q9UQ90 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 AC010654.1-201ENST00000615722 808 ntBASIC23.02■■□□□ 1.28
SPG7Q9UQ90 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
SPG7Q9UQ90 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 PTCHD3P3-201ENST00000403073 906 ntBASIC23.01■■□□□ 1.27
SPG7Q9UQ90 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 CFL1-202ENST00000524553 860 ntTSL 2 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 RIN3-211ENST00000557762 517 ntTSL 3 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC23.01■■□□□ 1.27
SPG7Q9UQ90 AC135776.1-201ENST00000319817 2481 ntBASIC23.01■■□□□ 1.27
SPG7Q9UQ90 WIZP1-201ENST00000531444 2299 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms