Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SALL4Q9UJQ4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.83■□□□□ 0.61
SALL4Q9UJQ4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SALL4Q9UJQ4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SALL4Q9UJQ4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.83■□□□□ 0.61
SALL4Q9UJQ4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SALL4Q9UJQ4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.83■□□□□ 0.61
SALL4Q9UJQ4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SALL4Q9UJQ4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SALL4Q9UJQ4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 AC022616.7-201ENST00000525383 220 ntBASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 AL512604.3-201ENST00000569583 964 ntBASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL4Q9UJQ4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 AC117947.1-201ENST00000427448 529 ntBASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 AC116407.2-201ENST00000613639 860 ntBASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.82■□□□□ 0.6
SALL4Q9UJQ4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 AC024563.2-201ENST00000603282 481 ntBASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms