Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC25.32■■□□□ 1.64
STAG3Q9UJ98 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
STAG3Q9UJ98 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
STAG3Q9UJ98 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
STAG3Q9UJ98 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC25.32■■□□□ 1.64
STAG3Q9UJ98 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 DAD1-205ENST00000543337 501 ntTSL 3 BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 AC092902.6-201ENST00000641783 218 ntBASIC25.31■■□□□ 1.64
STAG3Q9UJ98 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG3Q9UJ98 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 AC116562.4-201ENST00000641316 2276 ntBASIC25.3■■□□□ 1.64
STAG3Q9UJ98 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 SP100-208ENST00000427101 1922 ntTSL 2 BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 GREM1-201ENST00000560677 623 ntTSL 4 BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 AC025678.2-201ENST00000562061 970 ntBASIC25.3■■□□□ 1.64
STAG3Q9UJ98 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 AC105339.1-204ENST00000636249 355 ntBASIC25.3■■□□□ 1.64
STAG3Q9UJ98 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 PC-208ENST00000529047 1607 ntTSL 3 BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG3Q9UJ98 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 RPL28-205ENST00000558131 444 ntTSL 5 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
STAG3Q9UJ98 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 STK25P1-201ENST00000585406 838 ntBASIC25.28■■□□□ 1.64
STAG3Q9UJ98 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 AL353135.1-201ENST00000606729 504 ntBASIC25.28■■□□□ 1.64
STAG3Q9UJ98 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC25.28■■□□□ 1.64
STAG3Q9UJ98 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
STAG3Q9UJ98 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
STAG3Q9UJ98 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
STAG3Q9UJ98 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
STAG3Q9UJ98 PI4KAP1-204ENST00000612579 1703 ntBASIC25.27■■□□□ 1.64
STAG3Q9UJ98 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
STAG3Q9UJ98 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
STAG3Q9UJ98 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
STAG3Q9UJ98 LINC00982-205ENST00000420957 435 ntBASIC25.27■■□□□ 1.64
STAG3Q9UJ98 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
STAG3Q9UJ98 HLA-J-203ENST00000494367 1087 ntBASIC25.27■■□□□ 1.64
STAG3Q9UJ98 IGHV3-52-201ENST00000519770 353 ntBASIC25.27■■□□□ 1.64
STAG3Q9UJ98 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms