Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 AP001094.4-201ENST00000579008 2176 ntBASIC17.66■□□□□ 0.42
TREX1Q9NSU2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 AC016734.2-201ENST00000624325 1377 ntBASIC17.66■□□□□ 0.42
TREX1Q9NSU2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 AC246785.2-201ENST00000432512 513 ntBASIC17.65■□□□□ 0.42
TREX1Q9NSU2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 AC011840.4-201ENST00000578471 627 ntBASIC17.65■□□□□ 0.42
TREX1Q9NSU2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 AL121672.3-201ENST00000608644 468 ntBASIC17.65■□□□□ 0.42
TREX1Q9NSU2 AC019129.2-201ENST00000609837 1235 ntBASIC17.65■□□□□ 0.42
TREX1Q9NSU2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 AL139327.4-201ENST00000612362 153 ntBASIC17.65■□□□□ 0.42
TREX1Q9NSU2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TREX1Q9NSU2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.64■□□□□ 0.42
TREX1Q9NSU2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TREX1Q9NSU2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 CHCHD2P8-201ENST00000429873 447 ntBASIC17.64■□□□□ 0.41
TREX1Q9NSU2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 AC091607.1-201ENST00000490318 1060 ntBASIC17.64■□□□□ 0.41
TREX1Q9NSU2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 AC080080.1-201ENST00000625121 2420 ntBASIC17.64■□□□□ 0.41
TREX1Q9NSU2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX1Q9NSU2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 BX276092.5-203ENST00000456199 560 ntBASIC17.63■□□□□ 0.41
TREX1Q9NSU2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TREX1Q9NSU2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms