Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 LINC00896-202ENST00000609602 2128 ntBASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 AC133963.1-201ENST00000504166 1679 ntBASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 COX5BP2-201ENST00000392354 334 ntBASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 AP002383.4-201ENST00000442518 975 ntBASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 AP002414.4-201ENST00000589764 1148 ntBASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 Z69720.1-201ENST00000601483 472 ntBASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 AL138831.2-201ENST00000606564 490 ntBASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN4Q9NRR5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 AC233702.3-201ENST00000578656 1387 ntBASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 TPSP2-201ENST00000561760 610 ntBASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UBQLN4Q9NRR5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 REXO1L11P-201ENST00000620964 1927 ntBASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 LINC00304-203ENST00000565008 1864 ntBASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms