Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN4Q9NQP4 AL023806.1-201ENST00000603994 1649 ntBASIC17.5■□□□□ 0.39
PFDN4Q9NQP4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PFDN4Q9NQP4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN4Q9NQP4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN4Q9NQP4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN4Q9NQP4 CYP2D8P-201ENST00000433633 1490 ntBASIC17.5■□□□□ 0.39
PFDN4Q9NQP4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN4Q9NQP4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 AC092338.2-201ENST00000568827 1415 ntBASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 TSPY14P-201ENST00000303979 915 ntBASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 AL512604.3-201ENST00000569583 964 ntBASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 AC010240.3-201ENST00000607688 395 ntBASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PFDN4Q9NQP4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 AC099343.3-201ENST00000605834 2503 ntBASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN4Q9NQP4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.47■□□□□ 0.39
PFDN4Q9NQP4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms