Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 MIR564-202ENST00000385049 94 ntBASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMMDC1Q9NPL8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 PCED1CP-201ENST00000419887 785 ntBASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 SPDYE15P-201ENST00000424157 909 ntBASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 VENTXP5-201ENST00000523979 775 ntBASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 ZNF444P1-201ENST00000559497 298 ntBASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TIMMDC1Q9NPL8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMMDC1Q9NPL8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TIMMDC1Q9NPL8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMMDC1Q9NPL8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
TIMMDC1Q9NPL8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.08■□□□□ 0.33
TIMMDC1Q9NPL8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TIMMDC1Q9NPL8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TIMMDC1Q9NPL8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TIMMDC1Q9NPL8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMMDC1Q9NPL8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 IER3-202ENST00000376377 1350 ntBASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 SEC1P-202ENST00000473944 940 ntBASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 FAM86EP-206ENST00000510506 987 ntBASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 AL136038.3-201ENST00000561909 1096 ntBASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms