Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 KRT18P55-202ENST00000578578 1546 ntBASIC16.16■□□□□ 0.18
HMG20AQ9NP66 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 AC063926.3-201ENST00000624734 5658 ntBASIC16.16■□□□□ 0.18
HMG20AQ9NP66 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 AC068587.9-201ENST00000641814 219 ntBASIC16.16■□□□□ 0.18
HMG20AQ9NP66 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 AL355312.1-201ENST00000407115 2176 ntBASIC16.16■□□□□ 0.18
HMG20AQ9NP66 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20AQ9NP66 AC005052.1-201ENST00000625181 2492 ntBASIC16.16■□□□□ 0.18
HMG20AQ9NP66 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 RN7SL471P-201ENST00000580476 299 ntBASIC16.15■□□□□ 0.18
HMG20AQ9NP66 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMG20AQ9NP66 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
HMG20AQ9NP66 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HMG20AQ9NP66 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
HMG20AQ9NP66 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HMG20AQ9NP66 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20AQ9NP66 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms