Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 AC140658.5-201ENST00000438532 169 ntBASIC16.31■□□□□ 0.2
CHD8Q9HCK8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 AC020907.1-201ENST00000616460 1350 ntBASIC16.3■□□□□ 0.2
CHD8Q9HCK8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 ANKRD19P-201ENST00000338192 862 ntBASIC16.3■□□□□ 0.2
CHD8Q9HCK8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 AL590560.3-201ENST00000623350 461 ntBASIC16.3■□□□□ 0.2
CHD8Q9HCK8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.3■□□□□ 0.2
CHD8Q9HCK8 AL391825.1-201ENST00000457671 1364 ntBASIC16.29■□□□□ 0.2
CHD8Q9HCK8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD8Q9HCK8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 MIR4259-201ENST00000584466 101 ntBASIC16.28■□□□□ 0.2
CHD8Q9HCK8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 LINC00565-201ENST00000562710 2331 ntBASIC16.28■□□□□ 0.2
CHD8Q9HCK8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 MYCLP1-201ENST00000372451 1075 ntBASIC16.28■□□□□ 0.2
CHD8Q9HCK8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 TMEM14DP-201ENST00000422205 345 ntBASIC16.28■□□□□ 0.2
CHD8Q9HCK8 AC009477.1-201ENST00000452936 217 ntBASIC16.28■□□□□ 0.2
CHD8Q9HCK8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 RHOQP1-201ENST00000555758 579 ntBASIC16.28■□□□□ 0.2
CHD8Q9HCK8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.28■□□□□ 0.2
CHD8Q9HCK8 MIR6080-201ENST00000617359 66 ntBASIC16.28■□□□□ 0.2
CHD8Q9HCK8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms