Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 POM121L3P-201ENST00000419331 1163 ntBASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 AC009065.1-201ENST00000564055 1225 ntBASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 AC011840.4-201ENST00000578471 627 ntBASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
POLR1BQ9H9Y6 KRT8P32-201ENST00000512863 1461 ntBASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 AL353692.3-201ENST00000407031 1396 ntBASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 FAM197Y8-203ENST00000450145 560 ntBASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 TP73-AS1-207ENST00000624167 988 ntBASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 KRT89P-201ENST00000620027 1478 ntBASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1BQ9H9Y6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms