Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL049812.1-201ENST00000432563 2267 ntBASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC093484.2-201ENST00000580996 2166 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 MTND4P22-201ENST00000413116 1169 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC103564.2-201ENST00000432853 1299 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 RPS15P9-201ENST00000494093 319 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AP002981.1-201ENST00000517692 975 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 PDPK2P-202ENST00000562415 1191 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 MIR4751-201ENST00000578027 74 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC011467.4-201ENST00000594891 528 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC084781.1-201ENST00000613737 656 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC090116.1-201ENST00000615679 446 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL031430.1-201ENST00000642067 1039 ntBASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP9-3Q9BYQ3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms