Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 AL118558.3-201ENST00000607414 1079 ntBASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 AC007431.3-201ENST00000623221 587 ntBASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL25A1Q9BXS0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 AC243960.2-201ENST00000600996 747 ntBASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL25A1Q9BXS0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 AL049757.1-201ENST00000616842 1596 ntBASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 IGHJ2P-201ENST00000454480 60 ntBASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 AC015967.2-201ENST00000624092 234 ntBASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 AC006435.4-201ENST00000625037 234 ntBASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 AL356737.1-201ENST00000634391 234 ntBASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL25A1Q9BXS0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COL25A1Q9BXS0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms