Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDHCQ99643 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
SDHCQ99643 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.27■□□□□ 0.04
SDHCQ99643 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDHCQ99643 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDHCQ99643 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
SDHCQ99643 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDHCQ99643 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SDHCQ99643 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
SDHCQ99643 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDHCQ99643 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.27■□□□□ 0.04
SDHCQ99643 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDHCQ99643 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SDHCQ99643 DUSP5P2-201ENST00000426873 1033 ntBASIC15.27■□□□□ 0.04
SDHCQ99643 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.27■□□□□ 0.04
SDHCQ99643 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SDHCQ99643 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDHCQ99643 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SDHCQ99643 AC091390.4-202ENST00000476426 537 ntBASIC15.27■□□□□ 0.04
SDHCQ99643 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.27■□□□□ 0.04
SDHCQ99643 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.27■□□□□ 0.04
SDHCQ99643 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.27■□□□□ 0.04
SDHCQ99643 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SDHCQ99643 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.27■□□□□ 0.04
SDHCQ99643 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.27■□□□□ 0.04
SDHCQ99643 AL139246.5-201ENST00000606645 996 ntBASIC15.27■□□□□ 0.04
SDHCQ99643 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SDHCQ99643 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SDHCQ99643 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SDHCQ99643 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.27■□□□□ 0.03
SDHCQ99643 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SDHCQ99643 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SDHCQ99643 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDHCQ99643 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.27■□□□□ 0.03
SDHCQ99643 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.27■□□□□ 0.03
SDHCQ99643 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SDHCQ99643 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.26■□□□□ 0.03
SDHCQ99643 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SDHCQ99643 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SDHCQ99643 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.26■□□□□ 0.03
SDHCQ99643 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SDHCQ99643 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.26■□□□□ 0.03
SDHCQ99643 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.26■□□□□ 0.03
SDHCQ99643 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.26■□□□□ 0.03
SDHCQ99643 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.26■□□□□ 0.03
SDHCQ99643 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.26■□□□□ 0.03
SDHCQ99643 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SDHCQ99643 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.26■□□□□ 0.03
SDHCQ99643 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SDHCQ99643 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.26■□□□□ 0.03
SDHCQ99643 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.26■□□□□ 0.03
SDHCQ99643 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SDHCQ99643 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
SDHCQ99643 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.26■□□□□ 0.03
SDHCQ99643 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDHCQ99643 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.26■□□□□ 0.03
SDHCQ99643 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SDHCQ99643 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 OR6D1P-202ENST00000641007 5290 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms