Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.42■■□□□ 1.02
EYA3Q99504 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.42■■□□□ 1.02
EYA3Q99504 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.42■■□□□ 1.02
EYA3Q99504 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
EYA3Q99504 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
EYA3Q99504 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
EYA3Q99504 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.42■■□□□ 1.02
EYA3Q99504 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.42■■□□□ 1.02
EYA3Q99504 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.42■■□□□ 1.02
EYA3Q99504 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.42■■□□□ 1.02
EYA3Q99504 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.42■■□□□ 1.02
EYA3Q99504 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EYA3Q99504 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.42■■□□□ 1.02
EYA3Q99504 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
EYA3Q99504 GGTLC5P-201ENST00000617623 998 ntBASIC21.42■■□□□ 1.02
EYA3Q99504 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.42■■□□□ 1.02
EYA3Q99504 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
EYA3Q99504 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 AL096828.2-201ENST00000567259 1965 ntBASIC21.41■■□□□ 1.02
EYA3Q99504 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
EYA3Q99504 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.41■■□□□ 1.02
EYA3Q99504 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 IGLL3P-201ENST00000412472 434 ntBASIC21.41■■□□□ 1.02
EYA3Q99504 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.41■■□□□ 1.02
EYA3Q99504 CEND1P1-201ENST00000451006 455 ntBASIC21.41■■□□□ 1.02
EYA3Q99504 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
EYA3Q99504 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.41■■□□□ 1.02
EYA3Q99504 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.41■■□□□ 1.02
EYA3Q99504 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
EYA3Q99504 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
EYA3Q99504 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.41■■□□□ 1.02
EYA3Q99504 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EYA3Q99504 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EYA3Q99504 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EYA3Q99504 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.4■■□□□ 1.02
EYA3Q99504 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EYA3Q99504 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.4■■□□□ 1.02
EYA3Q99504 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.4■■□□□ 1.02
EYA3Q99504 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
EYA3Q99504 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EYA3Q99504 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EYA3Q99504 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
EYA3Q99504 AP002414.1-201ENST00000391405 1147 ntBASIC21.4■■□□□ 1.02
EYA3Q99504 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.4■■□□□ 1.02
EYA3Q99504 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.4■■□□□ 1.02
EYA3Q99504 DDX43P3-201ENST00000441064 443 ntBASIC21.4■■□□□ 1.02
EYA3Q99504 RFPL4AP1-201ENST00000530883 850 ntBASIC21.4■■□□□ 1.02
EYA3Q99504 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
EYA3Q99504 AC096734.2-201ENST00000562054 433 ntBASIC21.4■■□□□ 1.02
EYA3Q99504 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.4■■□□□ 1.02
EYA3Q99504 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.4■■□□□ 1.02
EYA3Q99504 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
EYA3Q99504 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.4■■□□□ 1.02
EYA3Q99504 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
EYA3Q99504 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
EYA3Q99504 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EYA3Q99504 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EYA3Q99504 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.4■■□□□ 1.02
EYA3Q99504 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.4■■□□□ 1.02
EYA3Q99504 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.4■■□□□ 1.02
EYA3Q99504 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
EYA3Q99504 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
EYA3Q99504 AC097637.2-201ENST00000624096 1997 ntBASIC21.39■■□□□ 1.02
EYA3Q99504 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
EYA3Q99504 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.39■■□□□ 1.02
EYA3Q99504 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
EYA3Q99504 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.39■■□□□ 1.02
EYA3Q99504 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
EYA3Q99504 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.39■■□□□ 1.01
EYA3Q99504 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
EYA3Q99504 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EYA3Q99504 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EYA3Q99504 PTCHD3P3-201ENST00000403073 906 ntBASIC21.39■■□□□ 1.01
EYA3Q99504 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.39■■□□□ 1.01
EYA3Q99504 CYMP-203ENST00000474680 1263 ntBASIC21.39■■□□□ 1.01
EYA3Q99504 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EYA3Q99504 PDPK2P-202ENST00000562415 1191 ntBASIC21.39■■□□□ 1.01
EYA3Q99504 AC004877.2-201ENST00000623941 599 ntBASIC21.39■■□□□ 1.01
EYA3Q99504 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.39■■□□□ 1.01
EYA3Q99504 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EYA3Q99504 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
EYA3Q99504 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EYA3Q99504 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
EYA3Q99504 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EYA3Q99504 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EYA3Q99504 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.38■■□□□ 1.01
EYA3Q99504 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.38■■□□□ 1.01
EYA3Q99504 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EYA3Q99504 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EYA3Q99504 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.38■■□□□ 1.01
EYA3Q99504 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EYA3Q99504 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms