Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM47Q96LD4 AC073592.3-201ENST00000625118 1834 ntBASIC20.71■□□□□ 0.91
TRIM47Q96LD4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 MIR149-201ENST00000384879 89 ntBASIC20.71■□□□□ 0.91
TRIM47Q96LD4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 NKAPP1-205ENST00000585790 367 ntBASIC20.71■□□□□ 0.91
TRIM47Q96LD4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 MTDHP4-201ENST00000600287 670 ntBASIC20.71■□□□□ 0.91
TRIM47Q96LD4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM47Q96LD4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TRIM47Q96LD4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 AC099343.3-201ENST00000605834 2503 ntBASIC20.7■□□□□ 0.9
TRIM47Q96LD4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 AC009947.1-201ENST00000444350 727 ntBASIC20.7■□□□□ 0.9
TRIM47Q96LD4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 AC009154.2-201ENST00000621177 724 ntBASIC20.7■□□□□ 0.9
TRIM47Q96LD4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 KRT18P28-201ENST00000453838 1332 ntBASIC20.7■□□□□ 0.9
TRIM47Q96LD4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM47Q96LD4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 AL354751.1-201ENST00000412768 1863 ntBASIC20.69■□□□□ 0.9
TRIM47Q96LD4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM47Q96LD4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM47Q96LD4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM47Q96LD4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM47Q96LD4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM47Q96LD4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM47Q96LD4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM47Q96LD4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRIM47Q96LD4 AC018470.1-201ENST00000624790 3129 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms