Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 AC079776.2-201ENST00000641154 1609 ntBASIC19.1■□□□□ 0.65
SNX27Q96L92 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SNX27Q96L92 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX27Q96L92 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX27Q96L92 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX27Q96L92 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX27Q96L92 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX27Q96L92 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.09■□□□□ 0.65
SNX27Q96L92 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX27Q96L92 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX27Q96L92 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX27Q96L92 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX27Q96L92 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX27Q96L92 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX27Q96L92 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX27Q96L92 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.09■□□□□ 0.65
SNX27Q96L92 AL031284.1-201ENST00000419297 478 ntBASIC19.09■□□□□ 0.65
SNX27Q96L92 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.09■□□□□ 0.65
SNX27Q96L92 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX27Q96L92 POLD2P1-201ENST00000511220 997 ntBASIC19.09■□□□□ 0.65
SNX27Q96L92 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SNX27Q96L92 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SNX27Q96L92 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.09■□□□□ 0.65
SNX27Q96L92 AP001160.2-201ENST00000596071 487 ntBASIC19.09■□□□□ 0.65
SNX27Q96L92 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX27Q96L92 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX27Q96L92 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SNX27Q96L92 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SNX27Q96L92 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
SNX27Q96L92 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SNX27Q96L92 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNX27Q96L92 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SNX27Q96L92 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SNX27Q96L92 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SNX27Q96L92 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNX27Q96L92 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SNX27Q96L92 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SNX27Q96L92 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNX27Q96L92 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
SNX27Q96L92 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNX27Q96L92 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SNX27Q96L92 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX27Q96L92 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX27Q96L92 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX27Q96L92 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.08■□□□□ 0.64
SNX27Q96L92 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SNX27Q96L92 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SNX27Q96L92 HNRNPDP1-201ENST00000439535 754 ntBASIC19.08■□□□□ 0.64
SNX27Q96L92 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX27Q96L92 AP001005.1-201ENST00000571755 1248 ntBASIC19.08■□□□□ 0.64
SNX27Q96L92 AC025062.2-201ENST00000605477 670 ntBASIC19.08■□□□□ 0.64
SNX27Q96L92 MIR7706-201ENST00000613747 67 ntBASIC19.08■□□□□ 0.64
SNX27Q96L92 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
SNX27Q96L92 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
SNX27Q96L92 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SNX27Q96L92 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX27Q96L92 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX27Q96L92 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SNX27Q96L92 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX27Q96L92 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX27Q96L92 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX27Q96L92 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
SNX27Q96L92 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX27Q96L92 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX27Q96L92 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX27Q96L92 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SNX27Q96L92 SPDYE21P-201ENST00000413323 827 ntBASIC19.07■□□□□ 0.64
SNX27Q96L92 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX27Q96L92 FAM8A3P-201ENST00000427218 844 ntBASIC19.07■□□□□ 0.64
SNX27Q96L92 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX27Q96L92 AC055717.3-201ENST00000622967 595 ntBASIC19.07■□□□□ 0.64
SNX27Q96L92 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX27Q96L92 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
SNX27Q96L92 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX27Q96L92 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX27Q96L92 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX27Q96L92 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SNX27Q96L92 SIGLEC16-201ENST00000599858 1437 ntBASIC19.07■□□□□ 0.64
SNX27Q96L92 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX27Q96L92 AC132938.5-201ENST00000624980 1813 ntBASIC19.07■□□□□ 0.64
SNX27Q96L92 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX27Q96L92 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNX27Q96L92 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX27Q96L92 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX27Q96L92 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNX27Q96L92 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX27Q96L92 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms