Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 AC124864.1-201ENST00000623408 392 ntBASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCPIP1Q96JH7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 IGHV3-41-201ENST00000613121 348 ntBASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCPIP1Q96JH7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
VCPIP1Q96JH7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VCPIP1Q96JH7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 LYSMD4-203ENST00000378904 2122 ntBASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 AC246785.2-201ENST00000432512 513 ntBASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 AC011840.4-201ENST00000578471 627 ntBASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 AL138831.2-201ENST00000606564 490 ntBASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCPIP1Q96JH7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 AL845331.1-201ENST00000424978 1190 ntBASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 AC007967.3-201ENST00000434308 558 ntBASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 AC122714.2-201ENST00000502787 707 ntBASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 FAM86EP-206ENST00000510506 987 ntBASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.63■□□□□ 0.57
VCPIP1Q96JH7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms