Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF183Q96D59 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RNF183Q96D59 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF183Q96D59 IGHV3-47-201ENST00000425060 335 ntBASIC13.17□□□□□ -0.3
RNF183Q96D59 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF183Q96D59 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.17□□□□□ -0.3
RNF183Q96D59 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 RN7SL510P-201ENST00000581311 263 ntBASIC13.17□□□□□ -0.3
RNF183Q96D59 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF183Q96D59 AC099336.1-202ENST00000602961 463 ntBASIC13.17□□□□□ -0.3
RNF183Q96D59 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF183Q96D59 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.17□□□□□ -0.3
RNF183Q96D59 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF183Q96D59 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF183Q96D59 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF183Q96D59 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 AC099343.3-201ENST00000605834 2503 ntBASIC13.16□□□□□ -0.3
RNF183Q96D59 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RNF183Q96D59 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF183Q96D59 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RNF183Q96D59 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
RNF183Q96D59 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 MINOS1P3-201ENST00000457048 203 ntBASIC13.16□□□□□ -0.3
RNF183Q96D59 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 KRT18P31-201ENST00000506277 1292 ntBASIC13.16□□□□□ -0.3
RNF183Q96D59 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.16□□□□□ -0.3
RNF183Q96D59 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RNF183Q96D59 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.16□□□□□ -0.3
RNF183Q96D59 AL353801.3-201ENST00000609898 542 ntBASIC13.16□□□□□ -0.3
RNF183Q96D59 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 AL031598.1-201ENST00000561511 1773 ntBASIC13.16□□□□□ -0.3
RNF183Q96D59 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RNF183Q96D59 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF183Q96D59 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RNF183Q96D59 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 CICP6-201ENST00000457191 2729 ntBASIC13.16□□□□□ -0.3
RNF183Q96D59 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
RNF183Q96D59 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF183Q96D59 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF183Q96D59 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 FER1L4-210ENST00000615531 5998 ntBASIC13.16□□□□□ -0.3
RNF183Q96D59 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RNF183Q96D59 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF183Q96D59 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF183Q96D59 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RNF183Q96D59 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF183Q96D59 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF183Q96D59 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF183Q96D59 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF183Q96D59 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF183Q96D59 AC084018.2-201ENST00000613093 2607 ntBASIC13.15□□□□□ -0.3
RNF183Q96D59 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF183Q96D59 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF183Q96D59 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
RNF183Q96D59 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF183Q96D59 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF183Q96D59 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF183Q96D59 NSUN5P1-202ENST00000421140 1535 ntBASIC13.15□□□□□ -0.3
RNF183Q96D59 NSUN5P2-203ENST00000457352 1529 ntBASIC13.15□□□□□ -0.3
RNF183Q96D59 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms