Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
FOXRED1Q96CU9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
FOXRED1Q96CU9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
FOXRED1Q96CU9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
FOXRED1Q96CU9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 AC133561.5-201ENST00000635547 218 ntBASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 AC100803.2-201ENST00000562459 1963 ntBASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXRED1Q96CU9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 EGLN1P1-201ENST00000531623 762 ntBASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 AC116562.4-202ENST00000641738 218 ntBASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXRED1Q96CU9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 KRT18P22-201ENST00000402024 1347 ntBASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 AC092338.2-201ENST00000568827 1415 ntBASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms