Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 REXO1L11P-201ENST00000620964 1927 ntBASIC17.07■□□□□ 0.32
VPS33AQ96AX1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS33AQ96AX1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 C2orf69P3-201ENST00000565542 1120 ntBASIC17.06■□□□□ 0.32
VPS33AQ96AX1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 AC010653.2-201ENST00000623505 997 ntBASIC17.06■□□□□ 0.32
VPS33AQ96AX1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS33AQ96AX1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 AC009947.2-201ENST00000444014 672 ntBASIC17.05■□□□□ 0.32
VPS33AQ96AX1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS33AQ96AX1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 TSPY14P-201ENST00000303979 915 ntBASIC17.04■□□□□ 0.32
VPS33AQ96AX1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 AC008550.1-201ENST00000511500 884 ntBASIC17.04■□□□□ 0.32
VPS33AQ96AX1 MIR4785-201ENST00000585005 73 ntBASIC17.04■□□□□ 0.32
VPS33AQ96AX1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS33AQ96AX1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms