Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 AC008764.6-201ENST00000595909 2069 ntBASIC17.6■□□□□ 0.41
SCAMP4Q969E2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 AC004870.1-201ENST00000315132 882 ntBASIC17.6■□□□□ 0.41
SCAMP4Q969E2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 TPM4P1-201ENST00000436100 807 ntBASIC17.6■□□□□ 0.41
SCAMP4Q969E2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 AP001269.4-201ENST00000609611 512 ntBASIC17.6■□□□□ 0.41
SCAMP4Q969E2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAMP4Q969E2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 AC122714.2-201ENST00000502787 707 ntBASIC17.59■□□□□ 0.41
SCAMP4Q969E2 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAMP4Q969E2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCAMP4Q969E2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCAMP4Q969E2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCAMP4Q969E2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SCAMP4Q969E2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCAMP4Q969E2 BX276092.7-203ENST00000637198 1536 ntBASIC17.58■□□□□ 0.41
SCAMP4Q969E2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SCAMP4Q969E2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCAMP4Q969E2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 AC079781.3-201ENST00000449110 356 ntBASIC17.58■□□□□ 0.4
SCAMP4Q969E2 SAPCD2P3-201ENST00000455031 850 ntBASIC17.58■□□□□ 0.4
SCAMP4Q969E2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms