Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC1Q92922 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC1Q92922 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC1Q92922 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC1Q92922 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC1Q92922 MED16-214ENST00000617672 554 ntTSL 5 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC1Q92922 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC1Q92922 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC1Q92922 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC1Q92922 AC073592.3-201ENST00000625118 1834 ntBASIC22.52■■□□□ 1.2
SMARCC1Q92922 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.52■■□□□ 1.19
SMARCC1Q92922 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.52■■□□□ 1.19
SMARCC1Q92922 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
SMARCC1Q92922 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 DAD1-205ENST00000543337 501 ntTSL 3 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC1Q92922 PI4KAP1-204ENST00000612579 1703 ntBASIC22.51■■□□□ 1.19
SMARCC1Q92922 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SMARCC1Q92922 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
SMARCC1Q92922 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22.5■■□□□ 1.19
SMARCC1Q92922 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.5■■□□□ 1.19
SMARCC1Q92922 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.5■■□□□ 1.19
SMARCC1Q92922 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.5■■□□□ 1.19
SMARCC1Q92922 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SMARCC1Q92922 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC1Q92922 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 MYCLP1-201ENST00000372451 1075 ntBASIC22.49■■□□□ 1.19
SMARCC1Q92922 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 AC002558.1-201ENST00000488906 803 ntBASIC22.49■■□□□ 1.19
SMARCC1Q92922 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 AC022145.2-201ENST00000598203 171 ntBASIC22.49■■□□□ 1.19
SMARCC1Q92922 AC239800.4-201ENST00000603712 296 ntBASIC22.49■■□□□ 1.19
SMARCC1Q92922 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.49■■□□□ 1.19
SMARCC1Q92922 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC1Q92922 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms