Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 AP002414.1-201ENST00000391405 1147 ntBASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 AC010507.1-201ENST00000633895 436 ntBASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 ELL2P1-201ENST00000413990 1906 ntBASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 SLC25A24-204ENST00000569674 2357 ntBASIC23.11■■□□□ 1.29
RAPGEF4Q8WZA2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 CNN2P11-201ENST00000429351 262 ntBASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 PDPK2P-202ENST00000562415 1191 ntBASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 AL353135.1-201ENST00000606729 504 ntBASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 AC004877.2-201ENST00000623941 599 ntBASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RAPGEF4Q8WZA2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 LINC00982-205ENST00000420957 435 ntBASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 CEND1P1-201ENST00000451006 455 ntBASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 AC096734.2-201ENST00000562054 433 ntBASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 GGTLC5P-201ENST00000617623 998 ntBASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 AC135776.1-201ENST00000319817 2481 ntBASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF4Q8WZA2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 LINC02084-201ENST00000606069 1096 ntBASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF4Q8WZA2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RAPGEF4Q8WZA2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC23.08■■□□□ 1.28
RAPGEF4Q8WZA2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC23.08■■□□□ 1.28
RAPGEF4Q8WZA2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms