Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 AC132008.2-207ENST00000454517 770 ntBASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 AC093677.2-201ENST00000600169 1863 ntBASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 LINC01126-201ENST00000623515 1646 ntBASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC1BQ8WUY9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 MIR574-201ENST00000385209 96 ntBASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 RBM17P3-201ENST00000417687 1192 ntBASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.77■□□□□ 0.6
DEPDC1BQ8WUY9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
DEPDC1BQ8WUY9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DEPDC1BQ8WUY9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
DEPDC1BQ8WUY9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.77■□□□□ 0.59
DEPDC1BQ8WUY9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DEPDC1BQ8WUY9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.77■□□□□ 0.59
DEPDC1BQ8WUY9 GMCL1P1-201ENST00000463439 1581 ntBASIC18.76■□□□□ 0.59
DEPDC1BQ8WUY9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DEPDC1BQ8WUY9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC1BQ8WUY9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC1BQ8WUY9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC1BQ8WUY9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC1BQ8WUY9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC1BQ8WUY9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC1BQ8WUY9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms