Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 AL513210.1-201ENST00000629608 234 ntBASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 AL805961.1-202ENST00000641562 540 ntBASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 AC009113.1-201ENST00000570267 2443 ntBASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 VN2R19P-201ENST00000442399 1052 ntBASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 KRT19P2-202ENST00000557173 1012 ntBASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 AC004817.3-201ENST00000602957 2129 ntBASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 AC003669.1-201ENST00000334569 611 ntBASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 RPS15P9-201ENST00000494093 319 ntBASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 MNT-208ENST00000575394 606 ntTSL 4 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC27.49■■□□□ 1.99
CFAP43Q8NDM7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 CD99-202ENST00000381180 530 ntTSL 2 BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 AC023141.5-201ENST00000458585 616 ntBASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 AL049757.1-201ENST00000616842 1596 ntBASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CFAP43Q8NDM7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 AC103564.2-201ENST00000432853 1299 ntBASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 FAM58CP-201ENST00000435741 640 ntBASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 AL035252.4-201ENST00000624174 288 ntBASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CFAP43Q8NDM7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 ACTG1P14-201ENST00000446382 1122 ntBASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 AC109322.1-201ENST00000524499 1264 ntBASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 AC091812.2-201ENST00000619081 385 ntBASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 PC-214ENST00000628663 1470 ntTSL 5 BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CFAP43Q8NDM7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CFAP43Q8NDM7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CFAP43Q8NDM7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC27.45■■□□□ 1.99
CFAP43Q8NDM7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC27.45■■□□□ 1.99
CFAP43Q8NDM7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
CFAP43Q8NDM7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms