Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 PMS2P7-201ENST00000506558 1336 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 LINC00602-201ENST00000629776 2065 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 HCG11-201ENST00000411553 5696 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 RPS2P28-201ENST00000314255 741 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 RCN1P2-201ENST00000398357 915 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 MIR940-201ENST00000401276 94 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 RPL13AP23-201ENST00000480739 586 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 POLD2P1-201ENST00000511220 997 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 AC139887.3-201ENST00000568585 713 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 AL355877.3-201ENST00000622820 899 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 ZNF259P1-201ENST00000407656 1365 ntBASIC20.06■□□□□ 0.8
RETREG2Q8NC44 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETREG2Q8NC44 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 SCARNA2-201ENST00000458748 420 ntBASIC20.05■□□□□ 0.8
RETREG2Q8NC44 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 MTDHP3-201ENST00000594186 672 ntBASIC20.05■□□□□ 0.8
RETREG2Q8NC44 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 AC243591.1-201ENST00000452967 1364 ntBASIC20.05■□□□□ 0.8
RETREG2Q8NC44 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 TP73-AS1-210ENST00000637775 1455 ntBASIC20.05■□□□□ 0.8
RETREG2Q8NC44 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETREG2Q8NC44 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 MIR1233-2-201ENST00000408138 82 ntBASIC20.04■□□□□ 0.8
RETREG2Q8NC44 MIR1233-1-201ENST00000408722 82 ntBASIC20.04■□□□□ 0.8
RETREG2Q8NC44 RBM17P3-201ENST00000417687 1192 ntBASIC20.04■□□□□ 0.8
RETREG2Q8NC44 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 AC018712.1-201ENST00000455767 687 ntBASIC20.04■□□□□ 0.8
RETREG2Q8NC44 AC068472.1-201ENST00000474589 881 ntBASIC20.04■□□□□ 0.8
RETREG2Q8NC44 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms