Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 AC016396.2-201ENST00000562575 1417 ntBASIC14.36□□□□□ -0.11
LINC00311Q8N616 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 ATP5G2P1-201ENST00000433580 426 ntBASIC14.36□□□□□ -0.11
LINC00311Q8N616 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 AC091607.1-201ENST00000490318 1060 ntBASIC14.36□□□□□ -0.11
LINC00311Q8N616 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 MIR3180-1-201ENST00000580374 94 ntBASIC14.36□□□□□ -0.11
LINC00311Q8N616 AP005901.3-202ENST00000581653 237 ntBASIC14.36□□□□□ -0.11
LINC00311Q8N616 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 MIR3180-3-201ENST00000584616 94 ntBASIC14.36□□□□□ -0.11
LINC00311Q8N616 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 AL139327.4-201ENST00000612362 153 ntBASIC14.36□□□□□ -0.11
LINC00311Q8N616 NPAP1P7-201ENST00000613027 823 ntBASIC14.36□□□□□ -0.11
LINC00311Q8N616 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LINC00311Q8N616 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00311Q8N616 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 KRT17P6-201ENST00000453795 1220 ntBASIC14.35□□□□□ -0.11
LINC00311Q8N616 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 TOB2P1-201ENST00000469761 992 ntBASIC14.35□□□□□ -0.11
LINC00311Q8N616 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 IGHV3-52-201ENST00000519770 353 ntBASIC14.35□□□□□ -0.11
LINC00311Q8N616 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 AC019129.2-201ENST00000609837 1235 ntBASIC14.35□□□□□ -0.11
LINC00311Q8N616 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC00311Q8N616 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00311Q8N616 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms