Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 AL031133.1-201ENST00000406807 723 ntBASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 AL121956.5-201ENST00000625261 221 ntBASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 AC009949.1-201ENST00000623048 1830 ntBASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TTC9CQ8N5M4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 TSPY22P-201ENST00000427496 604 ntBASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 AC011498.5-201ENST00000592027 486 ntBASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TTC9CQ8N5M4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TTC9CQ8N5M4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.02□□□□□ -0.17
TTC9CQ8N5M4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms