Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 PCED1CP-201ENST00000419887 785 ntBASIC17.14■□□□□ 0.33
KRT78Q8N1N4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 AL592071.1-201ENST00000611956 408 ntBASIC17.13■□□□□ 0.33
KRT78Q8N1N4 AC116407.4-201ENST00000623319 1061 ntBASIC17.13■□□□□ 0.33
KRT78Q8N1N4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT78Q8N1N4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 RN7SL606P-201ENST00000472779 293 ntBASIC17.12■□□□□ 0.33
KRT78Q8N1N4 AC011840.4-201ENST00000578471 627 ntBASIC17.12■□□□□ 0.33
KRT78Q8N1N4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 IER3-202ENST00000376377 1350 ntBASIC17.12■□□□□ 0.33
KRT78Q8N1N4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT78Q8N1N4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.11■□□□□ 0.33
KRT78Q8N1N4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 BX276092.7-203ENST00000637198 1536 ntBASIC17.11■□□□□ 0.33
KRT78Q8N1N4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms