Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 AL445228.2-201ENST00000605589 952 ntBASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 AC010331.1-201ENST00000611423 582 ntBASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC65Q8IXS2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 AL845331.1-201ENST00000424978 1190 ntBASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC65Q8IXS2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 AC246785.2-201ENST00000432512 513 ntBASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 VENTXP7-201ENST00000475503 772 ntBASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 AL358472.4-201ENST00000633140 710 ntBASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC65Q8IXS2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 KRT18P1-202ENST00000452408 1331 ntBASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 PKD1P1-201ENST00000458669 6805 ntBASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 AC125634.1-201ENST00000438758 1403 ntBASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 AC010460.3-201ENST00000511359 1579 ntBASIC19.66■□□□□ 0.74
CCDC65Q8IXS2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC65Q8IXS2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC65Q8IXS2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms