Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 AC116407.3-201ENST00000623905 1129 ntBASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 AL022326.1-202ENST00000641533 845 ntBASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 NEFHP1-201ENST00000412845 2629 ntBASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 AL671883.3-201ENST00000603274 991 ntBASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 AC107918.4-202ENST00000641623 219 ntBASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC60Q8IWA6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 AF228730.7-201ENST00000641842 219 ntBASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CCDC60Q8IWA6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC60Q8IWA6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC60Q8IWA6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC60Q8IWA6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC60Q8IWA6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC60Q8IWA6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 RPS2P28-201ENST00000314255 741 ntBASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 KLF4P1-201ENST00000412782 1185 ntBASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 AL020989.1-201ENST00000422979 469 ntBASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 AC008735.5-201ENST00000623544 497 ntBASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC60Q8IWA6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms