Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC25Q86WR0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC25Q86WR0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC25Q86WR0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC25Q86WR0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC25Q86WR0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC25Q86WR0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCDC25Q86WR0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC25Q86WR0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC25Q86WR0 AC022898.2-201ENST00000616822 1312 ntBASIC18.33■□□□□ 0.53
CCDC25Q86WR0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC25Q86WR0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 ABHD17AP1-201ENST00000358206 933 ntBASIC18.33■□□□□ 0.52
CCDC25Q86WR0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 TSPY17P-201ENST00000450329 467 ntBASIC18.33■□□□□ 0.52
CCDC25Q86WR0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 AL353719.1-201ENST00000566847 864 ntBASIC18.33■□□□□ 0.52
CCDC25Q86WR0 MIR3180-4-201ENST00000582223 153 ntBASIC18.33■□□□□ 0.52
CCDC25Q86WR0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC25Q86WR0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 HLA-J-201ENST00000462773 1622 ntBASIC18.32■□□□□ 0.52
CCDC25Q86WR0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 RPS2P55-201ENST00000397318 883 ntBASIC18.32■□□□□ 0.52
CCDC25Q86WR0 AC107956.1-201ENST00000494359 873 ntBASIC18.32■□□□□ 0.52
CCDC25Q86WR0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 AP005242.2-201ENST00000580065 1175 ntBASIC18.32■□□□□ 0.52
CCDC25Q86WR0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC25Q86WR0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 KRT18P29-201ENST00000397031 1267 ntBASIC18.31■□□□□ 0.52
CCDC25Q86WR0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 SLC25A1P2-201ENST00000430693 912 ntBASIC18.31■□□□□ 0.52
CCDC25Q86WR0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 FAM201B-201ENST00000458407 597 ntBASIC18.31■□□□□ 0.52
CCDC25Q86WR0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC25Q86WR0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms