Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NFE4Q86UQ8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NFE4Q86UQ8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NFE4Q86UQ8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NFE4Q86UQ8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 LINC00602-201ENST00000629776 2065 ntBASIC12.74□□□□□ -0.37
NFE4Q86UQ8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 MYLKP1-201ENST00000509077 1580 ntBASIC12.74□□□□□ -0.37
NFE4Q86UQ8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 ARMC10P1-201ENST00000313754 855 ntBASIC12.74□□□□□ -0.37
NFE4Q86UQ8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 AK4P3-201ENST00000418260 669 ntBASIC12.74□□□□□ -0.37
NFE4Q86UQ8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 AC092647.4-201ENST00000457211 535 ntBASIC12.74□□□□□ -0.37
NFE4Q86UQ8 COX11P1-201ENST00000489116 835 ntBASIC12.74□□□□□ -0.37
NFE4Q86UQ8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 AC010203.1-204ENST00000548782 407 ntBASIC12.74□□□□□ -0.37
NFE4Q86UQ8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 AL096828.2-201ENST00000567259 1965 ntBASIC12.74□□□□□ -0.37
NFE4Q86UQ8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.74□□□□□ -0.37
NFE4Q86UQ8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.73□□□□□ -0.37
NFE4Q86UQ8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 DUX4L26-201ENST00000489078 1255 ntBASIC12.73□□□□□ -0.37
NFE4Q86UQ8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 UBALD1-205ENST00000590891 2641 ntBASIC12.73□□□□□ -0.37
NFE4Q86UQ8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
NFE4Q86UQ8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NFE4Q86UQ8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NFE4Q86UQ8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.72□□□□□ -0.37
NFE4Q86UQ8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms