Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 AL355355.2-201ENST00000442321 338 ntBASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 CCR12P-201ENST00000446203 998 ntBASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 AC007663.1-201ENST00000438948 1240 ntBASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 CD99P1-205ENST00000527459 561 ntBASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 AC026471.5-201ENST00000615068 467 ntBASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 AL049637.2-201ENST00000641778 930 ntBASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 AC016396.2-201ENST00000562575 1417 ntBASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM1Q86UE6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 KRT8P47-201ENST00000604727 1398 ntBASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 PCDHB19P-201ENST00000570871 2371 ntBASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 AC012618.2-201ENST00000428058 849 ntBASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 AC233702.5-201ENST00000584107 538 ntBASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 AP001412.1-201ENST00000608405 714 ntBASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM1Q86UE6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms